PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00031661_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 110aa    MW: 11595.3 Da    PI: 10.9512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00031661_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-171059155
                               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                      ++y+G+r ++  g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+ 
  FANhyb_icon00031661_a.1.g00001.1 10 PRYRGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALKR 59
                                      68****9.55.7*********843...5***********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.7E-111059IPR001471AP2/ERF domain
CDDcd000181.30E-141067No hitNo description
SuperFamilySSF541711.05E-181168IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-261167IPR001471AP2/ERF domain
SMARTSM003806.4E-261173IPR001471AP2/ERF domain
PROSITE profilePS5103219.9811167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MASSSSGKHP RYRGIRCRGG KWVSEIREPR KTKRIWLGTF PTPEMAAAAY DVAALALKRE  60
DAILNFPGSI KSYPVPASMS ALDIRAAATA AATAAAAAAT LKTSGSREST
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011463809.11e-53PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9LYD31e-34DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLM5WDL26e-44M5WDL2_PRUPE; Uncharacterized protein
STRINGPOPTR_0003s12120.13e-40(Populus trichocarpa)
STRINGVIT_16s0100g00400.t016e-40(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-29ERF family protein